Below is a list of my publications. If you'd like to see a citation report, please have a look at these reports from Web of Science, Scopus, Google Scholar or orcid.

Submitted OR In revision OR In press

Downregulation of WT1 transcription factor gene expression is required to promote myocardial fate

  • Ines Joao Marques, Nadia Mercader, Alexander Ernst, Andrés Sanz-Morejón, Xavier Langa, Tanja Hetke, Adolfo Odriozola, Benoît Zuber; David Haberthür; Ruslan Hlushchuk; Carlos Torroja; Uta Naumann; Christoph Englert
  • submitted to PLOS Biology

Registration of serial sections: An evaluation method based on distortions of the ground truths

  • Oleg Lobachev, Takuya Funatomi, Alexander Pfaffenroth, Reinhold Förster, Lars Knudsen, Christoph Wrede, Michael Guthe, David Haberthür, Ruslan Hlushchuk, Thomas Salaets, Jaan Toelen, Simone Gaffling, Christian Mühlfeld, Roman Grothausmann

Automated segmentation and description of the internal morphology of human permanent teeth by means of micro-CT

Synchrotron X-ray microbeam irradiation of the face: Tolerance of normal rabbit bones and teeth

  • Jean Albert Laissue, Sébastien Barré, Stefan Bartzsch, Hans Blattmann, Audrey M. Bouchet, Valentin Djonov, David Haberthür, Ruslan Hlushchuk, Barbara Kaser-Hotz, Pierre Philippe Laissue, Géraldine LeDuc, Susanne Oswald Reding, Raphaël Serduc
  • submitted to Cancers

Combination of µCT and light microscopy for generation-specific stereological analysis of pulmonary arterial branches: a proof-of-concept study

  • Roman Grothausmann, Jonas Labode, Pablo Hernandez-Cerdan, David Haberthür, Ruslan Hlushchuk, Oleg Lobachev, Christina Brandenberger, Andre George Gie, Thomas Salaets, Jaan Toelen, Willi L. Wagner, Christian Mühlfeld

Computed tomography in Biomedicine

Micro-CT Imaging of Thiel-Embalmed and Iodine-Stained Human Temporal Bone for 3D Modeling of Middle Ear

  • Sebastian Halm, David Haberthür, Elisabeth Eppler, Valentin Djonov, Andreas Arnold
  • submitted to The Laryngoscope

Pulmonary acini exhibit complex changes during postnatal rat lung development

The C5a / C5a receptor 1 axis controls tissue neovascularization through CXCL4 release from platelets

  • Henry Nording, Frederic Emschermann, David Haberthür, Matthias Mezger, Johannes Patzelt, Kai Knoep, Anne Nording, Moritz Meusel, Roza Meyer-Saraei, Ruslan Hlushchuk, Daniel Sedding, Oliver Borst, Ingo Eitel, Robert Feil, Bernd Pichler, Emmanouil Chavakis, Triantafyllos Chavakis, Philipp von Hundelshausen, Jörg Köhl, Meinrad Gawaz
  • Under revision in Nature Communications

2020

The anatomical reliability of the Superficial Circumflex Iliac Artery Perforator (SCIP) Flap

Innovative high-resolution microCT of animal brain vasculature

Development of vascularized nerve scaffold using perfusion-decellularization and recellularization

Reptile-like physiology in Early Jurassic stem-mammals

Adaptation mechanism of the adult zebrafish respiratory organ to endurance training

2019

Several manuscripts started, none of them published in 2019, but in 2020…

2018

Direct determination of dissolution rates at crystal surface using 3D X-ray micro-tomography

Ex vivo microangioCT: Advances in microvascular imaging

2017

Synchrotron Microtomography Reveals the Fine Three-Dimensional Porosity of Composite Polysaccharide Aerogels

Correlative Imaging of the Murine Hind Limb Vasculature and Muscle Tissue by MicroCT and Light Microscopy

2016

Synchrotron X-ray computed microtomography study on gas hydrate decomposition in a sedimentary matrix

The total number of acini remains constant throughout postnatal rat lung development

On the path to the digital rock physics of gas hydrate bearing sediments – processing of in-situ synchrotron-tomography data

2015

Microstructural evolution of gas hydrates in sedimentary matrices observed with synchrotron X-ray computed tomographic microscopy

2014

Assessment of the 3D Pore Structure and Individual Components of Pre-Shaped Catalyst Bodies by X-Ray Imaging

Messtechnik und Sensorik am Paul Scherrer Institut

  • Dominic Greiffenberg, David Haberthür, Eberhard H. Lehmann, Jürg Schefer, Niklaus Schlumpf, Bernd Schmitt und Marco Stampanoni
  • Book chapter for Ingenieure bauen die Schweiz, Technikgeschichte aus erster Hand, Band 2
  • ISBN: 9783038239123

Synchrotron-based X-ray tomographic microscopy for visualization of three-dimensional collagen matrices

Efficient estimation of the total number of acini in adult rat lung

In-situ micro-structural studies of gas hydrate formation in sedimentary matrices

Imaging angiogenesis: Perspectives and opportunities in tumour research – A method display

2013

Visualization and stereological characterization of individual rat lung acini by high-resolution X-ray tomographic microscopy

2012

The simultaneous role of an alveolus as flow mixer and flow feeder for the deposition of inhaled submicron particles

2011

Local Strain Distribution in Real Three-Dimensional Alveolar Geometries

High-Resolution Phase-Contrast Imaging of Sub-micron Particles in Unstained Lung Parenchyma

Following Dynamic Processes by X-ray Tomographic Microscopy with Sub-second Temporal Resolution

2010

Radiation dose optimized lateral expansion of the field of view in synchrotron radiation X-ray tomographic microscopy

Deciphering complex, functional structures with synchrotron-based absorption and phase contrast tomographic microscopy

  • M. Stampanoni, J. Reichold, B. Weber, D. Haberthür, J. Schittny, J. Eller, F. N. Büchi and F. Marone
  • Proceedings SPIE 7804

High resolution tomographic imaging of the alveolar region of the mammalian lung

2009

Multimodal imaging for the detection of sub-micron particles in the gas-exchange region of the mammalian lung

  • David Haberthür, Manuela Semmler-Behnke, Shinji Takenaka, Wolfgang G Kreyling, Marco Stampanoni, Akira Tsuda and Johannes C Schittny
  • Journal of Physics: Conference Series Volume 186 Number 1

Enhanced cathepsin k release from osteoclasts is linked to idiopathic osteoporosis in mice with BK channel ablation

  • Sausbier, M, Dullin, C, Kabagema, C, Flockerzie, K, Haberthür, D, Wessels, J, Alves, F, Schittny, JC, Neuhuber, W, Ruth, P, Sausbier, U
  • 50th Annual Meeting of the Deutsche Gesellschaft für Experimentelle und Klinische Pharmakologie und Toxikologie

2008

Finite Element 3D Reconstruction of the pulmonary acinus imaged by Synchrotron X-ray tomography

  • Akira Tsuda, Nenad Filipovic, David Haberthür, Renee Dickie, Yasuto Matsui, Johannes C. Schittny
  • Journal of Applied Physiology 105: 964-976, 2008, First published June 26, 2008

Quality guided wide field x-ray tomographic imaging

Bioglass as Bone Substitute

2007

Contact Lenses

2003-2006

2002

Use of Lasers in Medicine: Tissue Soldering and Precise Cutting